Sunday, 15 July 2012

Current Research Highlights

I was having a read around the other week, and I found a link on the rareconnect website to this article:
http://www.sp-foundation.org/content/articles/State-of-HSP-Research.pdf

The article, written by Allen Bernard (whose daughter has HSP), is based on his discussions with five of the world's leading HSP researchers: 
  • Dr. Craig Blackstone at the National Institutes of Health in Bethesda, Maryland; 
  • Dr. Evan Reid at the University of Cambridge in the UK;
  • Dr. Gerardo Morfini at the University of Illinois, Chicago;
  • Dr. Joanna Bakowska at Loyola University, Chicago; and 
  • Dr. Michael Hanna at the Texas A&M University, Commerce.
Of course, its difficult to abbreviate a 13 page document into a single blog post, but here we go - I've lifted various paragraphs from the document here:

Researchers working on hereditary spastic paraplegia, better known as HSP, know more today than ever before. They are uncovering new linkages between the proteins that are at the heart of the disorder all the time. If you rewind the clock just five years, almost nothing was known about the proteins involved in HSP, how they interacted, what they did or why they did it. Since then much has been learned. If you go back 10 years, some of the proteins involved where just being uncovered. Go back 15 and HSP was almost a complete mystery.

One of things that HSP has going for it from a treatment point of view is the proteins like atlastin are fundamental to how cells work. Because of this, cell biologists are becoming increasingly interested in studying them so they can increase their knowledge of basic biology. This greatly expands the base of very smart people exploring what these proteins do and how they do it. For a very rare disease like HSP, this is like hitting a walk-off homerun because it opens the door to unlooked-for-discoveries by researchers outside of the HSP field that could lead to significant breakthroughs in how HSP is understood and treated.


Researchers are finding more and more targets - functions like axonal transport and structures called microtubules, for example - to focus on for potential treatments.  To find a 'wonder drug', you might think that money is the end all, but perhaps the biggest inhibitor to finding a treatment is lack of good animal models.


While HSP-like symptoms can be created in mice, for example, the phenotype that mice exhibit is less severe than in people and, therefore, harder to measure. Also, mice are just a few inches from head to tail while the cells involved in human HSP are up to a meter long. Mice also take a long time to mature. So when you work with mice, it can take up to a year or more for symptoms to show. 


That is why researchers often turn to fruit flies, which share the majority of their genes with humans (they just have fewer variations of them) and they reproduce very quickly so you can see results much sooner. But, fruit flies are not people. They can point you in the right direction; give you an idea of what to look for or what questions to ask but they won't serve as a stand in for us. 


Researchers like Dr. Morfini also work with squid since their axons can be removed, viewed under a microscope, and react to HSP similarly to our own. Squid have long been used to study other central nervous system (CNS) diseases like ALS and Parkinson's so a lot is known about their basic structure. 


This makes squid an important source of information since 99 percent of a motor neuron cell is actually made up of its axon. So axonal transport, or the movement of molecules and proteins up and down the long thin tube that is the axon, is also considered by many in the field to be an good place to look for a cause of HSP. Any disruption of this very finely tuned architecture could result in disease.


HSP could be a a "Gateway Disease," a disease that leads to treatments and cures for some of today's most intractable illnesses. There are  conditions like Charcot Marie Tooth Type 2b and some neuropathies (a loss of sensation in the feet and hands that can lead to amputations) that involve the same proteins as HSP and yet, on the outside, look completely different. This is the type of thing that gets researchers from other fields interested because there must be something very fundamental going on.

ALS and its cousin primary lateral sclerosis (PLS) also have something in common with HSP because of proteins. So, at some point in the future, a researcher in one of these fields or an HSP researcher could uncover a strong bond that could lead to a treatment for both. Multiple sclerosis (MS) is another disease where there appears to be some overlap but all of these connection need to be explored much more deeply.

Current research highlights:
Bone Morphogenic Protein (BMP) signaling


One of the more promising areas of research is being pursued by Dr. Reid at the University of Cambridge. He and his team are looking at something called the BMP signaling. While BMP stands for bone morphogenic protein, what's really important is it appears that atlastin (SPG3A), spastin (SPG4), maspardin (SPG21), spartin (SPG20), and NIPA1 (SPG6) are all part of the same functional pathway within the motor neuron. 


BMP signaling appears to play a key role in how axons grow and what they look like as they branch out into synapses. It is this distal end of the axon, the one at the base of the spine, that connects the neurons in your motor cortex to your legs. If BMP signaling causes HSP's symptoms, then you have a target to go after with drugs. Dr. Reid strongly believes this could be the case but more research needs to be done; particularly in animals; especially in mammals.



Endoplasmic Reticulum (ER)


Dr. Blackstone's work has led to the realization that spastin, atlastin, REEP1, reticulon2 and possibly NIPA1 are all involved in shaping a very important organelle inside the cell called endoplasmic reticulum (ER). And this is extremely important from a cell biology point of view because the ER sits at the heart of cell function and is believed to run the length of the axon.


Indeed, before the discovery of atlastin, no one really understood why the ER looked the way it did. Now, HSP has opened a window into this most essential part of the cell. A gateway, if you will, to this and many other areas of cellular function that are now better understood because of HSP.


Casein kinase  2 (CK2)



Working together, the research teams of Dr. Morfini and Dr. Peter Baas at Drexel University in Philadelphia have found a potential target for a treatment of SPG4, spastin. Like Dr. Reid, their findings are preliminary but, if they pan out, they might provide a new framework for the development of treatments that may help prevent motor neuron degeneration in HSP. 

Their findings indicate that the protein kinase CK2, which regulates the activity of other proteins, is abnormally activated by mutant forms of spastin. Abnormally activated CK2, in turn, negatively affects yet other proteins that are involved in the movement of materials along the axons in an important cellular process referred to as “axonal transport”



Like many other protein kinases, CK2 is a drugable target. What's exciting about Drs. Morfini's and Baas’s work is that CK2 has been studied for decades, so it is very well understood and there are currently cancer drugs in Phase I of the FDA approval process today to regulate it.

Thursday, 5 July 2012

Another new arrival - and cord blood storage

An update - a couple of weeks ago my wife gave birth to our second son. Double trouble in a few years, I'm sure!

We repeated the decision that we took for our first son, and decided to get the cord blood stored again. As a reminder for the first decision: http://hspjourney.blogspot.co.uk/2010/07/blue-sky-thinking.html.

One of the things which the genetics team said back at the beginning was that if we had two children, one with and one without the condition, then (provided there was a treatment available) the stem cells of the one without may be more of use to the one with. This info now becomes relevant.

In case anyone is interested, we used cells 4 life http://www.cells4life.co.uk/. The process was much easier this time as they now offer a phlebotomy service too. If anyone is thinking of doing this, then as a referral from an existing customer gets you (and me) a £50 Marks and Spencer voucher. Drop me a line....

Naturally, the HSP angle is still in the blue sky thinking zone, but there may be other uses for these as we go. Only the passing of the years will tell.

Friday, 15 June 2012

Symptoms Update - Shoe wear and 'skid marks'

I think I've spotted the next part of my symptoms. A look at my shoes shows that the heel is starting to be pushed outwards. I think this means that my gait must be changing. Interestingly it is noticeable on my left shoe more than my right shoe. The effect is slight, and I've had these shoes for a while.

Just thinking, if my heels are starting to poke out, I suppose that my knees must be getting closer together. I base this supposition on the scenario that its a walking thing, each step pushes my weight out and I dont think that my feet are further apart. I cant work out if my toes are pointing in more, and I'll need to do some more observing.

I'll also keep a lookout on my other pairs of shoes, as it's just one pair at the moment.

Also, on a similar front, I've noticed that I now have 'skid marks' on the cill of my car door where my right foot has slid over rather than me lifting it over after sitting down. I've only just noticed these marks, which perhaps suggests that its a fairly recent thing, having had the car for getting on for four years.

Overall, My conclusion is that my symptoms are starting to progress, and my wife has also noticed that my walking appears more difficult when I am tired or carrying heavy weights (3 year old boy sized). I wonder how long I'll be able to claim "no significant symptoms"....

Sunday, 3 June 2012

Researchers - Most published

OK, a bit more number crunching on the papers I downloaded. There are over 2500 researchers who have contributed to the 589 different papers - so that's on average some 4-5 people per paper. A list of 2500 researchers would be a silly thing to put here, so I've limited as follows:
* Anyone who has been an author on 10 or more papers
* Anyone who has been an author on 5 or more papers when the most recent paper is 2010 or later
* Anyone who has been an author when the most recent paper is in 2012

This gives 103 researchers, sorted by papers, last year, then name.

I haven't yet worked out how to convert the funny characters into proper letters. A later (potential) task for another day is to find a biography of each.


Researcher Details
Author Number Papers First Year Last Year
Brice A 28 1999 2010
Stevanin G 27 2004 2011
Fink JK 23 1995 2010
Crosby AH 20 2001 2010
Durr A 19 2003 2011
Santorelli FM 16 2000 2011
Klebe S 15 2004 2012
Hedera P 15 1999 2011
Nielsen JE 15 1997 2011
Hazan J 15 1993 2007
Reid E 14 2002 2011
Fontaine B 14 1994 2010
Dürr A 14 1994 2009
Schöls L 13 2002 2012
Beetz C 13 2006 2010
Klimpe S 12 2002 2012
Rouleau GA 12 1989 2012
Forlani S 12 2006 2011
Pericak-Vance MA 12 1994 2011
Proukakis C 12 2002 2011
Tessa A 12 2000 2011
Warner TT 12 2001 2011
Elleuch N 12 2006 2010
Patton MA 12 2001 2010
Hutchinson M 12 1997 2009
Schüle R 11 2006 2012
Kawarai T 11 2002 2011
Orlacchio A 11 2002 2011
Sperfeld AD 11 2004 2010
Patel H 11 2001 2008
Kassubek J 10 2004 2012
Bernardi G 10 2002 2011
Boukhris A 10 2008 2011
Shen L 10 2004 2011
Bruyn RP 10 1990 2009
Deufel T 10 2002 2009
Rainier S 10 1998 2008
Bouslam N 10 2005 2007
Kobayashi H 10 1995 2003
Bertini E 9 2000 2011
Depienne C 9 2006 2011
Rugarli EI 9 2002 2011
Blackstone C 8 2005 2011
De Michele G 8 1998 2011
Goizet C 8 2006 2011
Tang BS 8 2003 2011
Xia K 8 2003 2011
Zhao GH 8 2003 2011
Marchuk DA 8 2001 2010
Tallaksen CM 8 2001 2010
Feki I 7 2007 2011
Martinuzzi A 7 2003 2011
Sauter SM 7 2004 2011
Burgunder JM 7 1998 2010
Truchetto J 7 2008 2010
van de Warrenburg BP 7 2006 2010
Klopstock T 6 2006 2012
Bassi MT 6 2003 2011
Boespflug-Tanguy O 6 2002 2011
Braschinsky M 6 2009 2011
Gross-Paju K 6 2009 2011
Haldre S 6 2009 2011
Houlden H 6 1998 2011
Jiang H 6 2004 2011
Langer T 6 2003 2011
Mannan AU 6 2006 2011
De Jonghe P 6 1999 2010
Filla A 6 1998 2010
Lossos A 6 2006 2010
Mostacciuolo ML 6 2000 2010
Yang Y 6 2000 2010
Otto S 5 2006 2012
Criscuolo C 5 2004 2011
D'Angelo MG 5 2006 2011
Denora PS 5 2006 2011
Gaudiello F 5 2004 2011
Mundwiller E 5 2009 2011
Svenstrup K 5 2007 2011
Wood NW 5 2001 2011
Ludolph AC 5 1998 2010
Mhiri C 5 2008 2010
Siddique T 5 1994 2010
Zatz M 5 2002 2010
Ki CS 4 2005 2012
Brais B 3 2006 2012
Rioux MF 3 2006 2012
Dion PA 2 2007 2012
Dupré N 2 2007 2012
Karle K 2 2009 2012
Lee ST 2 2010 2012
Lee WY 2 2005 2012
Ahn JY 1 2012 2012
Caplan JP 1 2012 2012
Cho JW 1 2012 2012
Kohl Z 1 2012 2012
Levert A 1 2012 2012
Noreau A 1 2012 2012
Osmolak AM 1 2012 2012
Ratzka S 1 2012 2012
Szuto A 1 2012 2012
Thibodeau P 1 2012 2012
Wallenberg RB 1 2012 2012
Yoon WT 1 2012 2012

Saturday, 19 May 2012

Another community

In my search for different on-line HSP communities I found "patientslikeme". This site has an HSP community with 56 people with the condition.

Personally, I'm reluctant to join this community as they sell users information in order to make profit, therefore I'll just mention this for information.

http://www.patientslikeme.com/conditions/493-hereditary-spastic-paraplegia


Sunday, 6 May 2012

Joining Communities

In the last few weeks I've changed my policy slightly - from a passive to an active contributor. 

Previously, other than telling my immediate family, I'd been staying silent about my blog. Naturally I'd been keeping my eyes out to see if had been popping up anywhere. And, until a month or two ago it seemed to be 'under the radar' then I spotted it on rarediseasecommunity - now called rareconnect.

So, I joined up with rareconnect, and posted a link to this blog: http://www.rareconnect.org/en/community/hereditary-spastic-paraplegia/article/link-to-my-fsp-hsp-blog

I also joined the hsp support group http://hspgroup.org/, and am starting off letting members know about this blog. With hindsight, I cant find a good reason why I hadn't sign up here earlier, but done now.

I'm not one for 'shouting from the rooftops', so this will be a gradual process.

Sunday, 29 April 2012

Researchers - Initial Numbers

So, Thanks to a post from Rob from EURODIS on Rarediseasecommunity, I have been looking at PubMed, which has a directory of medical publications. On 20th April there were 589 different papers listed for HSP. I'm doing a bit of number crunching on this information. There are two simple sets of numbers - number of papers per year and number of papers per journal which are easy to find out:

Papers per year:


Year Papers
2012 4
2011 35
2010 38
2009 49
2008 45
2007 45
2006 48
2005 28
2004 36
2003 36
2002 30
2001 27
2000 18
1999 25
1998 24
1997 13
1996 4
1995 9
1994 10
1993 16
1992 8
1991 13
1990 18
1989 6
1988 3
1978 1


Papers per journal - note that I've yet to decipher the abbreviations:


PapersByJournal
Journal Papers Most Recent
Neurology 48 2010
J Neurol Neurosurg Psychiatry 24 2010
J Neurol Sci 23 2011
J Neurol 22 2011
Arch Neurol 22 2009
Neurogenetics 21 2011
Am J Hum Genet 20 2008
Eur J Neurol 17 2012
J Med Genet 16 2009
Ann Neurol 15 2007
Mov Disord 13 2011
Clin Genet 13 2011
Hum Mutat 12 2011
Hum Mol Genet 12 2010
Brain 10 2010
Hum Genet 10 2010
No To Shinkei 9 2003
Acta Neurol Scand 9 2002
Zhonghua Yi Xue Yi Chuan Xue Za Zhi 8 2009
Am J Med Genet 8 2002
Clin Neurol Neurosurg 6 2011
Eur J Hum Genet 6 2009
Nat Genet 6 2007
Neuromuscul Disord 5 2009
Ryoikibetsu Shokogun Shirizu 5 2001
J Child Neurol 4 2010
Chin Med J (Engl) 4 2009
J Cell Biol 4 2009
Neuropediatrics 4 2006
Rinsho Shinkeigaku 4 2001
Dev Med Child Neurol 4 1993
Can J Neurol Sci 3 2012
Neurol Sci 3 2011
Pediatr Neurol 3 2011
Prenat Diagn 3 2010
Brain Dev 3 2010
Arq Neuropsiquiatr 3 2010
J Neurochem 3 2009
Funct Neurol 3 2007
Curr Opin Neurol 3 2007
Muscle Nerve 3 2007
Eur Neurol 3 2007
Neuroradiology 3 2006
Cell 3 2005
Curr Biol 3 2005
Zh Nevropatol Psikhiatr Im S S Korsakova 3 1991
Clin Neurophysiol 2 2011
Acta Neuropathol 2 2011
Genome Res 2 2011
J Clin Neuromuscul Dis 2 2011
BMC Biol 2 2010
J Clin Invest 2 2010
BMC Neurol 2 2010
Am J Med Genet B Neuropsychiatr Genet 2 2009
Arch Phys Med Rehabil 2 2009
Hong Kong Med J 2 2009
J Inherit Metab Dis 2 2008
Lancet Neurol 2 2008
Neurosci Lett 2 2008
J Biol Chem 2 2008
Expert Opin Pharmacother 2 2007
Int J Obstet Anesth 2 2007
Am J Med Genet A 2 2005
Neuropathology 2 2005
Amyotroph Lateral Scler Other Motor Neuron Disord 2 2005
Neuropathol Appl Neurobiol 2 2004
Nervenarzt 2 2003
Genomics 2 2003
Semin Neurol 2 1999
Nat Med 2 1998
Pediatr Neurosurg 2 1995
Genet Couns 2 1994
Ital J Neurol Sci 2 1993
Eur Arch Psychiatry Neurol Sci 2 1990
Psychosomatics 1 2012
Spinal Cord 1 2011
Eur J Paediatr Neurol 1 2011
Curr Mol Med 1 2011
Eur J Med Genet 1 2011
Orphanet J Rare Dis 1 2011
Nat Rev Neurosci 1 2011
PLoS Genet 1 2011
Genet Med 1 2011
Gait Posture 1 2011
Amyotroph Lateral Scler 1 2011
Rev Esp Anestesiol Reanim 1 2011
Mol Cell Neurosci 1 2011
Neurologist 1 2011
Mitochondrion 1 2011
Zh Nevrol Psikhiatr Im S S Korsakova 1 2010
No To Hattatsu 1 2010
PLoS Biol 1 2010
Toxicol Lett 1 2010
Dis Model Mech 1 2010
J Lipid Res 1 2010
Ann Clin Lab Sci 1 2010
Hum Brain Mapp 1 2010
Neuroepidemiology 1 2009
Rom J Morphol Embryol 1 2009
Clin Rehabil 1 2009
AJNR Am J Neuroradiol 1 2009
Ann Anat 1 2009
Adv Exp Med Biol 1 2009
Synapse 1 2009
Nature 1 2008
Acta Neurol Scand Suppl 1 2008
SEB Exp Biol Ser 1 2008
BMC Med Genet 1 2008
J Neurosci 1 2008
J Neurogenet 1 2008
J Intellect Disabil 1 2008
Neuroscience 1 2008
Med Arh 1 2007
Mol Cell Biol 1 2007
Mol Neurobiol 1 2007
Brain Res Bull 1 2007
Pediatr Radiol 1 2007
Tidsskr Nor Laegeforen 1 2007
Curr Neurol Neurosci Rep 1 2006
Anesth Analg 1 2006
J Hum Genet 1 2006
Trends Mol Med 1 2006
Ren Fail 1 2006
Panminerva Med 1 2006
Proc Natl Acad Sci U S A 1 2006
Pharmacol Ther 1 2006
Cell Mol Neurobiol 1 2005
Ceylon Med J 1 2005
Biochem Biophys Res Commun 1 2005
J Clin Neurosci 1 2004
Ned Tijdschr Geneeskd 1 2004
Parkinsonism Relat Disord 1 2004
Neuroreport 1 2003
IUBMB Life 1 2003
Exp Neurol 1 2003
Nihon Rinsho 1 2002
Masui 1 2002
Int Rev Neurobiol 1 2002
Neurol Clin 1 2002
Curr Opin Genet Dev 1 2001
Rev Prat 1 2001
Pharmacogenomics 1 2001
Retina 1 2000
Rev Neurol (Paris) 1 2000
Neurophysiol Clin 1 2000
Can J Anaesth 1 1999
Biochim Biophys Acta 1 1999
Electromyogr Clin Neurophysiol 1 1999
Physiother Res Int 1 1999
Neurochirurgie 1 1998
Zhonghua Min Guo Xiao Er Ke Yi Xue Hui Za Zhi 1 1998
Schweiz Med Wochenschr 1 1998
Hum Hered 1 1998
Am J Phys Med Rehabil 1 1998
J Clin Epidemiol 1 1997
Epilepsia 1 1997
Acta Paediatr 1 1996
Acta Neurochir Suppl 1 1995
Brain Pathol 1 1995
Aust N Z J Psychiatry 1 1995
Vojnosanit Pregl 1 1993
Electroencephalogr Clin Neurophysiol 1 1993
Paraplegia 1 1993
J Neurosurg Sci 1 1993
Neurourol Urodyn 1 1993
Aust Vet J 1 1993
Orthop Rev 1 1992
Minerva Med 1 1992
Clin Neuropharmacol 1 1991
Clin Exp Neurol 1 1991
Fortschr Neurol Psychiatr 1 1991
J Assoc Physicians India 1 1990
Am J Hematol 1 1990
N Engl J Med 1 1990
Prog Clin Biol Res 1 1989
J Med Assoc Thai 1 1989
Medicina (B Aires) 1 1988
Ann Pediatr (Paris) 1 1978


More details in a later post - the link with all this lovely info is here: http://www.ncbi.nlm.nih.gov/pubmed?term=%22Spastic%20Paraplegia,%20Hereditary%22[Majr]